The Lacuna Project

lacuna (n.) a gap in a record where something should be

Independent research. Not affiliated with any government, agency, or company.

Chapter 4

The Filtered Record

Abstract

Clinicians and regulators judge a product by the studies that reach them. Between a completed study and its reader, the record passes through several filters. In the antidepressant literature, journals carried a far more favorable set of trial results than the FDA held on file. A trial of paroxetine in adolescents was published as positive in 2001, reanalyzed from its own records as negative in 2015, and given a formal expression of concern in 2025. Fewer than half of the trials due to report results under federal law by 2019 had done so on time. Drugs granted accelerated approval stayed on the market, paid for by Medicare and Medicaid, while their confirmatory trials ran past deadline. In the glyphosate record, safety reviews written in part by Monsanto staff appeared under independent authors' names, and EPA relied on one of them in 2020.

4.1 Two records of the same trials

§4.1.1

A drug sponsor submits the results of every trial in a new drug application to the FDA, positive or negative. The journal literature receives only the trials that authors submit and editors accept. A comparison of the two records measures what publication removed.

Finding MED-4.1Peer-reviewed

The FDA judged 38 of 74 antidepressant trials (51 percent) positive. In the published literature, 48 of 51 trials (94 percent) appeared positive.

In 2008 Turner and colleagues compared FDA reviews of 74 trials of 12 antidepressants, involving 12,564 patients, with the published literature. FDA reviewers judged 38 trials positive. Of the 36 trials the FDA judged negative or questionable, 22 were never published and 11 were published in a way that conveyed a positive result. The 23 unpublished trials had enrolled 3,449 patients. The published literature overstated the drugs' pooled effect size by 32 percent relative to the FDA data.

Evidence: Exhibit 089, Exhibit 090

Mechanism: The filtered record

Antidepressant trials: FDA judgment and publication (Turner et al., 2008)
FDA judgmentPublished as positivePublished as negativeUnpublishedTotal
Positive370138
Negative or questionable1132236
Total4832374
§4.1.2

Turner's group could not determine whether sponsors, authors or journals were responsible for the missing publications. The comparison measured the completeness of the published record and did not test whether the drugs worked.

§4.1.3

In 2022 the same group repeated the comparison for 30 trials of four newer antidepressants, involving 13,747 patients. All 15 trials the FDA judged positive were published transparently. Of the 15 negative trials, seven were published transparently, six went unpublished and two were presented as positive. Transparent publication of negative trials rose from 11 percent in the older cohort to 47 percent, and the effect-size gap narrowed to 0.24 in FDA data against 0.29 in journals. The 2022 study examined efficacy and did not test safety reporting.

4.2 Study 329

Finding MED-4.2Peer-reviewed

A 2001 article reported paroxetine effective and well tolerated in depressed adolescents. A 2015 reanalysis of the same trial's records found no advantage over placebo on the prespecified outcomes and counted 11 paroxetine patients with suicidal or self-injurious behavior where the article had counted five.

Study 329 randomized 275 adolescents with major depression to paroxetine, imipramine or placebo for eight weeks. Keller and colleagues published it in 2001 and concluded that paroxetine was "generally well tolerated and effective for major depression in adolescents." In 2015 Le Noury and colleagues reanalyzed the trial under the Restoring Invisible and Abandoned Trials initiative (RIAT), using the original protocol and the underlying trial records. Neither paroxetine nor imipramine was superior to placebo on the prespecified efficacy variables.

Evidence: Exhibit 091, Exhibit 092, Exhibit 093, Exhibit 094

Mechanism: The filtered record

Study 329: patients with suicidal or self-injurious behavior, by source
SourceParoxetine (n=93)Imipramine (n=95)Placebo (n=87)
Published article, 2001531
Sponsor's report, acute phase731
RIAT reanalysis, acute and taper phases, 20151142
§4.2.1

The three counts used different observation periods and coding. The reanalysis covered the taper phase as well as the acute phase and included one possible case in each comparison group. The table counts patients with recorded behaviors; it does not count deaths. The reanalysis authors acknowledged that classifying adverse events requires judgment.

§4.2.2

Keller and colleagues replied that they added the secondary measures before the blind was broken because the original depression scale measured adolescents' symptoms poorly, and they disputed the reanalysis's methods and its authors' impartiality.

§4.2.3

On 30 September 2025 the Journal of the American Academy of Child and Adolescent Psychiatry published an expression of concern about the 2001 article online. The notice appeared in the June 2026 issue. An expression of concern alerts readers and leaves the article in the literature. The article had been in print for twenty-four years when the notice was attached.

4.3 Results reported late or not at all

§4.3.1

Under the Final Rule of the FDA Amendments Act, the sponsor of a covered clinical trial must submit summary results to ClinicalTrials.gov by a set deadline.

Finding MED-4.3Peer-reviewed

Of 4,209 clinical trials required by federal law to report their results by September 2019, 1,722 (40.9 percent) had reported on time.

DeVito and colleagues followed 4,209 trials whose results were due under the Final Rule. By the 16 September 2019 cutoff, 2,686 trials (63.8 percent) had submitted results at any time, counting submissions still under quality review. The cohort excluded trials not yet due, trials outside the rule and trials granted a delay.

Evidence: Exhibit 095, Exhibit 096

Mechanism: The filtered record

§4.3.2

FDA's register of notices of noncompliance with the results-reporting requirement lists Acceleron Pharma as its earliest entry, with a notice dated 27 April 2021 and a response dated 13 December 2021. The register lists further notices through October 2026 and records no penalty outcomes.

§4.3.3

In the same cohort, industry sponsors had higher adjusted odds of reporting on time than non-industry, non-government sponsors (odds ratio 3.08, 95% CI 2.52–3.77).

4.4 Approved before confirmed

§4.4.1

Accelerated approval allows the FDA to approve a drug for a serious condition on a surrogate endpoint, such as tumor shrinkage, judged reasonably likely to predict clinical benefit. The sponsor must then run confirmatory trials. A failed confirmation can lead to withdrawal or a change to the label. Until confirmation, the drug is sold and prescribed on the surrogate evidence.

Finding MED-4.4Primary record

Of 104 accelerated drug approvals with unfinished confirmatory trials in 2022, 35 had a trial past its original completion date. Medicare and Medicaid spent more than $18 billion on the 18 drugs involved from 2018 to 2021.

The HHS Office of Inspector General reviewed 278 accelerated approval applications granted through December 2021, using trial status as of 5 May 2022. The $18 billion is total Medicare and Medicaid spending on the 18 drugs over those four years; it does not isolate spending after a deadline passed.

Evidence: Exhibit 097, Exhibit 098, Exhibit 099, Exhibit 100

Mechanism: The study not run

§4.4.2

Liu, Kesselheim and Cliff followed 46 cancer drug–indication pairs granted accelerated approval from 2013 to 2017, with records through 2023. Twenty showed a survival or quality-of-life benefit. Nine converted to regular approval without showing either. Ten were withdrawn, and seven remained pending.

§4.4.3

In 2025 the Inspector General reviewed 24 accelerated approvals, ten chosen because they raised concern and fourteen chosen at random. It found unplanned analyses, internal disagreements or incomplete meeting records in three: aducanumab, hydroxyprogesterone caproate and eteplirsen. The Inspector General stated that the review was not a compliance review. By 18 May 2026 the FDA had implemented the recommendation on meeting documentation and had not implemented the recommendation on criteria for referral to its review council.

§4.4.4

The Consolidated Appropriations Act, 2023, gave the FDA authority to require a confirmatory trial to be underway before accelerated approval or within a set period after it. FDA's January 2025 guidance on that authority describes how the agency interprets "underway." The guidance is marked "Draft. Not for implementation. Contains non-binding recommendations."

4.5 A retraction after twenty-five years

§4.5.1

In March 2015 the International Agency for Research on Cancer (IARC) classified glyphosate, the active ingredient in Monsanto's Roundup, as probably carcinogenic to humans. Chapter 5 records the regulatory and legal history that followed (§5.7).

Finding MED-4.5Reported

In November 2025 a toxicology journal retracted a 2000 glyphosate safety review, citing possible uncredited writing by Monsanto employees. A Monsanto-funded 2016 expert panel had corrected its acknowledgments in 2018 to add a Monsanto scientist.

Williams, Kroes and Munro published a safety evaluation and risk assessment of Roundup and glyphosate for humans in Regulatory Toxicology and Pharmacology in 2000. According to Retraction Watch, the retraction notice, posted online in November 2025, cited "apparent contributions" by Monsanto employees as co-writers without acknowledgment and the review's reliance on unpublished Monsanto studies although other studies existed. Retraction Watch quotes a Monsanto email in which toxicologist William Heydens, discussing a later paper, wrote: "Recall this is how we handled Williams Kroes & Munro 2000."

After the IARC classification, the consultancy Intertek convened an expert panel funded by Monsanto, whose reviews appeared in a 2016 supplement of Critical Reviews in Toxicology. A 2018 correction to the panel's overview paper added the contributions of Barry Lynch of Intertek and William Heydens of Monsanto to the acknowledgments.

Evidence: Exhibit 101, Exhibit 102

Mechanism: The filtered record

§4.5.2

Kroes died in 2006 and Munro in 2011. In 2017 New York Medical College told Science that it had found "no evidence" that Williams violated its ghostwriting policy.

Exhibit 101 · Journal notice

Retraction notice: Williams, Kroes and Munro, Safety evaluation and risk assessment of the herbicide Roundup and its active ingredient, glyphosate, for humans (2000)

Retraction Watch reports that the retraction notice, posted online in November 2025 and running over 1,000 words, cites Monsanto employees' 'apparent contributions' as co-writers without acknowledgment and reliance on unpublished Monsanto studies although other studies existed. It quotes a Monsanto email from toxicologist William Heydens, written about a later paper: 'Recall this is how we handled Williams Kroes & Munro 2000.' It reports that New York Medical College told Science in 2017 it had found no evidence that Williams violated its ghostwriting policy, and that Kroes died in 2006 and Munro in 2011.

Source
Regulatory Toxicology and Pharmacology (Elsevier), reported by Retraction Watch
Date
November 2025
Grade
Reported
Document
https://retractionwatch.com/2025/12/04/glyphosate-safety-article-retracted-elsevier-monsanto-ghostwriting
Accessed
2026-11-09
Cited by
Findings citing this exhibit
Note
Additional report: https://www.thenewlede.org/2025/12/citing-serious-ethical-concerns-journal-retracts-key-monsanto-roundup-safety-study/

4.6 A review the regulators used

Finding MED-4.6Reported

An EPA Inspector General memo found that a Monsanto scientist made substantive, uncredited contributions to a 2013 glyphosate review. EPA relied on the review in 2020, and EFSA cited it in 2023.

Kier and Kirkland's 2013 review of glyphosate genotoxicity appeared in Critical Reviews in Toxicology. An EPA Office of Inspector General memo, from an inquiry opened in 2017 and obtained by Mother Jones in June 2026, concluded that Monsanto's David Saltmiras made substantive contributions to the review. Saltmiras was credited only in the acknowledgments, which the memo called "a form of research misconduct." In 2012 emails, Kirkland rejected co-authorship for Saltmiras because it would undermine the review's "independent" status.

Evidence: Exhibit 103

Mechanism: The filtered record, Oversight paid for by the overseen

§4.6.1

EPA's 2020 glyphosate assessment relied on the review for its data and for its summaries of 16 other studies. The European Food Safety Authority cited it in 2023. According to Mother Jones, EPA knew of the Inspector General's finding and did not disclose it. Kirkland denies ghostwriting, and Bayer, Monsanto's owner, says the memo drew on limited documents. Taylor & Francis opened an investigation after Oreskes and Kaurov requested a retraction.

4.7 The response to IARC

Finding MED-4.7Reported

Before IARC classified glyphosate in 2015, a Monsanto plan set the goal "Orchestrate Outcry with IARC Decision." In 2016 its public relations agency compiled stakeholder lists that Bayer's outside counsel counted at 1,208 names in 14 documents, covering seven countries and EU institutions.

The plan was written in February 2015, before IARC met and announced its classification in March. It stated the goal "Orchestrate Outcry with IARC Decision—Industry conducts robust media/social media outreach on process and outcome" and named the Genetic Literacy Project among three industry partners. The plan is known through documents published by U.S. Right to Know.

Evidence: Exhibit 104, Exhibit 105

Mechanism: Managing the narrative

§4.7.1

In 2016 the Brussels office of FleishmanHillard compiled stakeholder lists for Monsanto. Bayer's outside counsel, Sidley Austin, reported on 5 September 2019 that 14 list documents held 1,208 names, covering France, Germany, Italy, the Netherlands, Poland, Spain, the United Kingdom and EU-institution lists, and that 1,475 individuals had been notified. Sidley found no support for the allegation that the lists were illegal. According to press reports, a French list of about 200 people, including journalists and politicians such as Ségolène Royal, led Le Monde to file a complaint and a French prosecutor to open an inquiry in May 2019, and Bayer suspended the agency.

4.8 Two cases from Chapter 3

§4.8.1

Chapter 3 records the Guinea-Bissau research on DTP vaccination and infant mortality (Finding 3.7). A 2026 article in Vaccine listed ten registered trials by the Bandim group whose primary outcomes were partly or wholly unpublished. One was a DTP-related trial reported to have enrolled 6,534 children.

Exhibit 019 · Research article

Non-emerging primary trial results from the Bandim health project

Støvring and colleagues report in Vaccine (March 2026) on registered trials of the Bandim Health Project whose primary results had not been published. The register records ten such trials, including a DTP-related trial (NCT00244673) reported to have enrolled 6,534 children.

Source
Vaccine
Date
2026
Grade
Peer-reviewed
Document
https://doi.org/10.1016/j.vaccine.2026.128302
Accessed
2026-11-09
Cited by
Findings citing this exhibit
§4.8.2

Chapter 3 also records the Henry Ford Health study comparing vaccinated and unvaccinated children (Finding 3.5). The study was completed around 2020, was not submitted for publication, and entered the public record in September 2025 through a Senate subcommittee.

4.9 Where the filters operate

§4.9.1

The filters described above operate at different points between a completed study and its reader: the decision to publish, the choice of outcomes to report, the deadline for posting results, the approval granted before confirmation, and the names on a review. The corrections came from an academic comparison with FDA files, an independent reanalysis, the HHS and EPA Inspectors General, documents produced in litigation, an outside audit of registered trials, and journals acting years or decades after publication.

From publication or completion to formal action
DocumentPublished or completedFormal actionYears
Williams, Kroes & Munro review2000Retracted, November 202525
Study 329 article (Keller et al.)2001Expression of concern, September 202524
Kier & Kirkland review2013Inspector General inquiry opened 2017; publisher investigation open in 2026—
Intertek panel reviews2016Acknowledgments corrected, 20182
Henry Ford Health cohortc. 2020Entered Senate record, September 2025; unpublished—
Ten registered Bandim trialsVariousPrimary outcomes partly or wholly unpublished as of 2026—
§4.9.2

Some filters have narrowed. Transparent publication of negative antidepressant trials rose from 11 to 47 percent in the newer cohort, the FDA has issued results-reporting notices since 2021, and Congress strengthened the confirmatory-trial requirement through the Consolidated Appropriations Act, 2023. In November 2026 a reader of the literature found the Study 329 article in print with an expression of concern, the Kier and Kirkland review under a publisher investigation, and the primary outcomes of ten Bandim trials partly or wholly unpublished.

Key findings

  1. The FDA judged half of 74 antidepressant trials positive; the published literature presented 94 percent of published trials as positive (4.1).
  2. Study 329 was published as showing paroxetine effective in adolescents; a reanalysis of its records found no efficacy advantage and more suicidal and self-injurious behavior than the article reported (4.2).
  3. Fewer than half of the trials due to report results under federal law by 2019 had reported on time (4.3).
  4. Medicare and Medicaid spent more than $18 billion on accelerated-approval drugs whose confirmatory trials were overdue (4.4).
  5. A glyphosate safety review was retracted 25 years after publication for possible uncredited Monsanto writing, and a Monsanto-funded panel corrected its acknowledgments (4.5).
  6. EPA relied in 2020 on a review its Inspector General found to contain substantive, uncredited contributions by a Monsanto scientist (4.6).
  7. Monsanto planned to "orchestrate outcry" at IARC's decision before it was made, and its agency compiled lists that Bayer's outside counsel counted at 1,208 names (4.7).
  8. Ten registered Bandim trials have primary outcomes partly or wholly unpublished, and the Henry Ford cohort study remains unpublished (3.7, 3.5).

Version 0.1. Last updated 9 November 2026. Report an error.